serialization - PyMC change backend after sampling -


I am using PyMC in the analysis of some high energy physics data. It has worked for perfection, the analysis is complete, and we are working on the paper.

I have a small problem, though. I ran the sample with the RAM database backend in the IAIthon kernel process, for a few months this mark is sitting around in memory. The problem is that the workstation support staff want to upgrade a kernel and want to reboot the workstation. This will lose the mark. I want to keep these marks (as opposed to just creating new ones) because they are those which I have made all the plots. I would like to include a part of the mark (only the parameters of interest) as the supplementary material with publication.

Is it possible to take an existing series in pymc.MCMC Object created with backend, change in a different backend, and mark the series?

Trace values ​​are stored in the form of nappace arrays, so you have the value of each parameter in the file You can use numpy.savetxt to send. (This text is the backend that comes under the hood.)

It is a good idea to save your current mark, I suggest that before publishing your analysis takes the time to repeat.


Comments

Post a Comment

Popular posts from this blog

ios - How do I use CFArrayRef in Swift? -

I am using Objective-class in my Swift Project through a bridging header. The method signature looks like this: - Some cement (some type) some parameters; I started by getting an example of class, calling method, and storing the value: var myInstance = MyClassWithThatMethod (); Var cfArr = myInstance.someMethod (some value); Then try to get the value in the array: var valueInArrayThatIWant = CFArrayGetValueAtIndex (cfArr, 0); However, I get the error unmanaged & lt; Cfarray & gt; Not like 'CFArray' . Unmanaged & lt; Cfarray & gt; also means? I looked, but I do not need to change the array in a fast array (though it would be good). I need to be able to get value from the array. I also tried CFArray method to pass in a function: func doSomeStuffOnArray (myArray: NSArray) {} Although I get the same error when using: doSomeStuffOnArray (cfArr); // unmanaged & lt; CFArray & gt; I am using CFArray because I want to sto...
Read more

eclipse plugin - Run java code error: Workspace is closed -

To create an automated project, I created a plug-in project with the following dependencies: Org.eclipse.core.resources org.eclipse.equinox.registry org.eclipse.core.runtime and the following The Java class is located in the src folder: Package Examiner; Import org.eclipse.core.resources.IProject; Import org.eclipse.core.resources.IWorkspaceRoot; Import org.eclipse.core.resources.ResourcesPlugin; Import org.eclipse.core.runtime.CoreException; Import org.eclipse.core.runtime.IProgressMonitor; Import org.eclipse.core.runtime.NullProgressMonitor; Public class tes {public static zero main (string [] args) {// TODO auto generated method stub IProgressMonitor progress monitor = new NullProgressMonitor (); IWorkspaceRoot root = ResourcesPlugin.getWorkspace (). GetRoot (); Ipoject project = root.jetproject ("desired projectname"); Try {Project.create (progress monitor); Project.open (progressMonitor); } Grip (CoreException E) {// TODO Auto generated blocking block e....
Read more

c - Error on building source code in VC 6 -

When I create my project in VC6, the BScMKE reports the following error Linking .. Creating Library ... .. / ... / PB / Bean / Debub / ICEERP.Lib and Object ........ P.B. / Bean / DBube / ICREPlay.APP Browse information file ... BSMMK: ​​error can not be read from BK 1505: file '../../PB/bin/TmpOut/ICReplay/Debug/ICReplay_PB.bsc' Error executing bscmake.exe Can someone help me? 2 Reason for reference from: "ICReplay_PB .bsc "file will be corrupted The trunk of the file will be happening with the compiler running out of disk space or is being interrupted when creating .sbr file I think this answer will help you!
Read more